Genus of bacteria
Rubrobacter is a genus of Actinomycetota .[ 4] [ 1] It is radiotolerant and may rival Deinococcus radiodurans in this regard.[ 5] [ 4]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[ 2] and National Center for Biotechnology Information (NCBI).[ 3]
16S rRNA based LTP _10_2024[ 6] [ 7] [ 8]
120 marker proteins based GTDB 09-RS220[ 9] [ 10] [ 11]
Rubrobacter
R. taiwanensis Chen et al. 2004
R. spartanus Norman et al. 2017
R. marinus Chen et al. 2020
R. tropicus Chen et al. 2020
R. indicoceani Chen et al. 2018
R. radiotolerans (Yoshinaka, Yano & Yamaguchi 1973) Suzuki et al. 1989
Incertae sedis:
See also
References
^ a b Suzuki K, Collins MD, Iijima E, Komagata K (1988). "Chemotaxonomic characterization of a radiotolerant bacterium Arthrobacter radiotolerans : Description of Rubrobacter radiotolerans gen. nov., comb. nov". FEMS Microbiol. Lett . 52 (1– 2): 33– 39. doi :10.1111/j.1574-6968.1988.tb02568.x .
^ a b A.C. Parte; et al. "Rubrobacter" . List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2025-02-28 .
^ a b C.L. Schoch; et al. "Rubrobacter" . National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28 .
^ a b Stackebrandt E, Rainey FA, Ward-Rainey NL (1997). "Proposal for a new hierarchic classification system, Actinobacteria classis nov" . Int. J. Syst. Bacteriol . 47 (2): 479– 491. doi :10.1099/00207713-47-2-479 .
^ Chen MY, Wu SH, Lin GH, et al. (2004). "Rubrobacter taiwanensis sp. nov., a novel thermophilic, radiation-resistant species isolated from hot springs" (PDF) . Int. J. Syst. Evol. Microbiol . 54 (Pt 5): 1849– 55. doi :10.1099/ijs.0.63109-0 . PMID 15388754 .
^ "The LTP" . Retrieved 10 December 2024 .
^ "LTP_all tree in newick format" . Retrieved 10 December 2024 .
^ "LTP_10_2024 Release Notes" (PDF) . Retrieved 10 December 2024 .
^ "GTDB release 09-RS220" . Genome Taxonomy Database . Retrieved 10 May 2024 .
^ "bac120_r220.sp_labels" . Genome Taxonomy Database . Retrieved 10 May 2024 .
^ "Taxon History" . Genome Taxonomy Database . Retrieved 10 May 2024 .
Candidate Phyla Radiation
"Synergistetes" "Thermocalda"
"Cyanoprokaryota" "Firmicutes"
Bacillota
Bacillota A
"Clostridiia "
"Thermoanaerobacteria"
Thermosediminibacteria
Bacillota D
Bacillota E
Sulfobacillia
Symbiobacteriia
Thermaerobacteria
Bacillota G
"Hydrogenisporia"
Limnochordia
"Desulfotomaculota "
"Carboxydocellia"
"Carboxydothermia"
"Dehalobacteriia"
Desulfitobacteriia
Desulfotomaculia
"Moorellia"
Peptococcia
Syntrophomonadia
Thermincolia
"Halanaerobiaeota"
"Selenobacteria"
Incertae sedis